Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015787837.1_cds_XP_016432452.1_271
CDS Infomation

[gene=LOC107759063] [db_xref=GeneID:107759063] [protein=transcription factor IIIA-like] [protein_id=XP_016432452.1] [location=join(29515..29634,32917..33032,33221..33314,38631..38786,39320..39463,39931..40216,40326..40561,40788..40931,41036..41224)] [gbkey=CDS]
Sequence

ATGGTGAAGGTGAATAACGGAGTGAGTGTCAAGGTTTTAGTTCAATGGGCTAACTTGAAG
GCGGAGGATGCAACTTGGGAAGATTGGGGATACCTCAAAAGCAAGTTCCCAGAATTTGTG
GAAGTCACAAATATTATCCATCTACAAGATCAGAAATTGAGTATCAAAAAAGGAGACTAT
GCTACATCCAAAAGGACAGGAGAAGAGTTTGTTGTTGTGACTGTCAGCTTCAACAAAACT
TTTGCTGGTGCCACTGTCATCTACTGTGATGAGGTGGCTGTAATGGAGAGGGTTTCCAGT
GAAGAAGTGTTACCAAAGGATTTTCCACTAGGTTTTTGGTGTTTTGTGGCTGTGCAGATA
TTGGGCGAAATGGGAGAAGAGAGAGAAGTAATATTCAGAGATATAAGACGATATTACTGT
GAATTTTGTGGGATTTGCCGCTCCAAACAGTCCCTTATCTCCTCTCATATCCTCTCCTAT
CATCAAGATGAAATGGAGAAGCGGAAAGATGAGGCAAATGAAGATGCAAAGATAAAGAAA
TGTCCAAAACTGAATATTTGTGAAGAATGTGGTGTGAGCTTTCAGAAGCCTGCTCATTTG
AAGCAGCATATGCAGAGTCATTCACTCGAGAGGCTATTTGTTTGCCATATAGATGATTGC
CAGTCCAGCTACCGTAGAAAGGATCACTTGACGAGACATCTCTTGCAGCACCAAGGGAAG
TTGTTTGAGTGTCCCGTTGATGGTTGCAAACGCTCATTTAGTATTCAAGGCAACATGACT
CGGCATGTCAAAGAGATGCATGACCACTGTGCCTCCCCTGAGGCCAATCTTCCAAAGCAC
TATGTCTGTTCAGAACCTGGTTGTGGGAAGGTGTTTAAATTTGCATCCAAATTAAAGAAA
CATGAGGATTCTCATGTTAAGTTGGAGACGATGGAGGCACTTTGTTTAGAGCCAGGCTGT
ATGAAACATTTCACAAATGAGAAATGCCTCAAGGAACACATAGAGAGTTGCCACCAGCAT
ATTGTGTGTGAAATATGTGGAACCAAGCAATTGAAGAAGAATATTAAGCGGCATCTCCGG
ACGCATGAAGAAGAGTCTACATCGGAAAGAATAAAATGTGAATTCCAGGATTGTCAGCAC
ACTTTCTCCACTAAATCAAATCTTATTAAGCACGTCAAAGCTGTGCACTTGGGGGATAAA
CCATTCTCATGTAGCATTGTTGGTTGTGATATGAAATTTGCCTTCAAGCATGTGAGAGAT
AGACATGAAAAGTCTGGCTGCCATGTTTATACTCCTGGTGATTTCATAGAGGCTGACGAG
CAATTCCGTTCCAGACCCAGAGGTGGTAGGAAGAGGAAGCTTCCTGTTTTCGAGGCAATT
ATGCGGAAAAGGATAACACCACCCTGCGGTACAGATCCTGTGTTCTATCAAGGATCAGAA
TATCTCTCATGGTTACTCTCAGCAGAATCAGATGAAGAGCTGTGA

Peptide Sequence

PEP ID

XP_016432452.1
PEP Infomation

PREDICTED: transcription factor IIIA-like [Nicotiana tabacum]
Sequence

MVKVNNGVSVKVLVQWANLKAEDATWEDWGYLKSKFPEFVEVTNIIHLQDQKLSIKKGDY
ATSKRTGEEFVVVTVSFNKTFAGATVIYCDEVAVMERVSSEEVLPKDFPLGFWCFVAVQI
LGEMGEEREVIFRDIRRYYCEFCGICRSKQSLISSHILSYHQDEMEKRKDEANEDAKIKK
CPKLNICEECGVSFQKPAHLKQHMQSHSLERLFVCHIDDCQSSYRRKDHLTRHLLQHQGK
LFECPVDGCKRSFSIQGNMTRHVKEMHDHCASPEANLPKHYVCSEPGCGKVFKFASKLKK
HEDSHVKLETMEALCLEPGCMKHFTNEKCLKEHIESCHQHIVCEICGTKQLKKNIKRHLR
THEEESTSERIKCEFQDCQHTFSTKSNLIKHVKAVHLGDKPFSCSIVGCDMKFAFKHVRD
RHEKSGCHVYTPGDFIEADEQFRSRPRGGRKRKLPVFEAIMRKRITPPCGTDPVFYQGSE
YLSWLLSAESDEEL

Transcript Sequence

Gene sequence data has not been registered.